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DIGIT


A database of immunoglobulin variable domain sequences and related search and modelling tools

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Maistas 1.0


Maìstas is a fully automatic pipeline aimed at building and assessing three-dimensional models for alternative splicing isoforms.

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CoCoMaps


A server for calculating contact maps of X-ray, NMR and predicted structures. COCOMAPS (bioCOmplexes COntact MAPS) is a web application to easily and effectively analyse and visualize the interface in biological complexes (such as protein-protein, protein-DNA and protein-RNA complexes), by making use of intermolecular contact maps. Reference: Vangone et al, 2011

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ConsRank


ConsRank is a server for the analysis, comparison and ranking of docking models based on inter-residue contacts. CONSRANK (CONSensus-RANKing) is a web service to easily and effectively analyse and rank docking models of protein-protein and protein-nucleic acid complexes, based on the frequency of inter-residue contacts. Reference: Chermak et al, 2015

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PMDB


PMDB collects three dimensional protein models obtained by structure prediction methods

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Tabhu 1.0


Tabhu is a web server for antibody humanisation specifically designed to help researcher in each step of a humanisation experiment. It provides tools to: Select the suitable humane template; Select the grafting region; Predict the non-human and humanised antibody paratope; Select the minimum set of back-mutations to retain the parental binding affinity; Build the three-dimensional … Continue reading Tabhu 1.0

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PIGS 1.0


PIGS is a web server for the automatic modeling of immunoglobulin variable domains based on the canonical structure method. It has a user-friendly and flexible interface, that allows the user to choose templates (for the frameworks and the loops) and modeling strategies in an automatic or manual fashion.

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proABC 1.0


proABC is a predictor of Antibody-Antigen interactions based on the Random Forest Algorithm. User submitted sequences are automatically aligned and annotated according to their source organism and germline families.

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Inosinome Atlas


A database of A-to-I RNA editing events in human tissues.

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UTRdb and UTRsite


A collection of sequences and regulatory motifs on the untranslated regions of eukaryotic mRNAs.

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