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Functional genomics

Command-line tool
Modular pipeline for comprehensive analysis of small RNA-Seq data, comprising specific tools for adapter trimming,...
Library
Topology based pathway analysis specifically tailored to long time series without replicates. It combines dimension...
Library
R package for topological pathway analysis integrating gene and miRNA expression profiles using validated and/or...
Library
This tool is for topological gene set analysis. It implements a two-step empirical approach based...
Library
Package able to gather and make easily available the contents of the four major pathway...
Library
Novel approach to perform pathway analysis using gene expression data. Given the structure of a...
Command-line tool
Software suite that will help bioinformaticians to analyze genomes AND phenomic experiments. The final purpose...
Web application
COLOMBOS technology-based web portal for exploring and analyzing a comprehensive Vitis vinifera specific cross-platform expression...
FEATURED
Web application
Web based portal for exploring and analyzing comprehensive organism-specific cross-platform expression compendia of bacterial organisms....

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