ASSIsT is a tool for the efficient filtering of Illumina Infinium/BeadExpress based SNP markers. It allows analysis of different type of experimental population, namely Cross Pollinated (CP - F1), Back Cross (BC), F2 and collections of unrelated individuals (Germplasm). Results can be exported to different formats and therefore can be fed straight to marker-trait association analysis software like FlexQTL, HapMap, GAPIT, JoinMap, PLINK, Structure and Tassel.

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