Software tool that scans a set of sequences (e.g. promoters) from co-regulated or co-expressed genes with motifs describing the binding specificity of known transcription factors and assesses which motifs are significantly over- or under-represented, providing thus hints on which transcription factors could be common regulators of the genes studied, together with the location of their candidate binding sites in the sequences
Topics
- Sequence analysis, Sequence sites, features and motifs
Description
Programming Language
- C++, PHP
Development stage
Mature
Licence
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Cost
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Accessibility
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