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Maistas 1.0


Maìstas is a fully automatic pipeline aimed at building and assessing three-dimensional models for alternative splicing isoforms.

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PICMI 1.0


PICMI is a tool to map nucleotide and amino acid variations on genomes and on all gene isoforms.

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ConsRank


ConsRank è un webservice per l’analisi, il confronto e il ranking di “docking models” basati su contatti inter-residuali. CONSRANK (CONSensus-RANKing) che permette analisi semplici ed efficaci di tali modelli di tra proteinee e proteine e acidi nucleici complessi, basandosi sulla frequenza dei loro contatti inter-residuali. Riferimento: Chermak et al, 2015

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PMDB


PMDB collects three dimensional protein models obtained by structure prediction methods

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proABC 1.0


proABC is a predictor of Antibody-Antigen interactions based on the Random Forest Algorithm. User submitted sequences are automatically aligned and annotated according to their source organism and germline families.

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Tabhu 1.0


Tabhu is a web server for antibody humanisation specifically designed to help researcher in each step of a humanisation experiment. It provides tools to: Select the suitable humane template; Select the grafting region; Predict the non-human and humanised antibody paratope; Select the minimum set of back-mutations to retain the parental binding affinity; Build the three-dimensional … Continua a leggere Tabhu 1.0

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PIGS 1.0


PIGS is a web server for the automatic modeling of immunoglobulin variable domains based on the canonical structure method. It has a user-friendly and flexible interface, that allows the user to choose templates (for the frameworks and the loops) and modeling strategies in an automatic or manual fashion.

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BioMas


BioMas (Bioinformatic analysis of Metagenomic AmpliconS) is a user-friendly pipeline for the assessment of the taxonomic composition of microbial communities from amplicon-based NGS data. The current version of BioMaS can be used for the analysis of Illumina MiSeq reads (SE or PE) aimed at the determination of bacterial and fungal populations through the TANGO-based comparative … Continua a leggere BioMas

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SpliceAid-F


A database of human splicing factors and their RNA-binding sites

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UTRdb and UTRsite


A collection of sequences and regulatory motifs on the untranslated regions of eukaryotic mRNAs.

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